curatedPCaDatasets_igc | R Documentation |
MultiAssayExperiment object containing gene expression (gex) and immune cell estimates from IGC's Expression Project for Oncology (expO) with a subset for prostate cancer
An MAE object spanning 83 men with prostate cancer
matrix with 12798 rows and 83 columns, of gene expression data
matrix with 22 rows and 83 columns, of cibersort based deconvolution data
matrix with 39 rows and 83 columns, of xcell based deconvolution data
matrix with 8 rows and 83 columns, of epic based deconvolution data
matrix with 11 rows and 83 columns, of quantiseq based deconvolution data
data.frame with 4 rows and 83 columns, of cell types based on ESTIMATE method
matrix with 4 rows and 83 columns, of risk scores and AR scores
matrix with 11 rows and 83 columns, of mcp-counter based deconvolution data
A MultiAssayExperiment corresponding to the study and its available omics.
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=gse2109
mae_igc <- getPCa('igc')
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.