curatedPCaDatasets_wallace | R Documentation |
MultiAssayExperiment object containing gene expression (gex) and immune cell estimates from Wallace et al.
An MAE object spanning 83 men with prostate cancer
matrix with 12783 rows and 89 columns, of gene expression data
matrix with 22 rows and 83 columns, of cibersort based deconvolution data
matrix with 39 rows and 89 columns, of xcell based deconvolution data
matrix with 8 rows and 89 columns, of epic based deconvolution data
matrix with 11 rows and 89 columns, of quantiseq based deconvolution data
data.frame with 4 rows and 89 columns, of cell types based on ESTIMATE method
matrix with 4 rows and 89 columns, of risk scores and AR scores
matrix with 11 rows and 89 columns, of mcp-counter based deconvolution data
A MultiAssayExperiment corresponding to the study and its available omics.
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6956
(PubMed)
mae_wallace <- getPCa('wallace')
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