TRON-Bioinformatics/splice2neo: Aberrant splice junction analysis with associated mutations

This package provides functions for analyzing alternative splicing and aberrant splice junctions and their creation from or association with somatic mutations. It integrates the output of several tools that predict splicing effects from mutation or RNA-seq data into a unified splice junction format. Splice junctions can be annotated with affected transcript sequences, CDS, and resulting peptide sequences.

install.packages("remotes")
remotes::install_github("TRON-Bioinformatics/splice2neo")