is_in_rnaseq: test if junction was found in corresponding RNA-seq data

In TRON-Bioinformatics/splice2neo: Aberrant splice junction analysis with associated mutations

test if junction was found in corresponding RNA-seq data

Description

test if junction was found in corresponding RNA-seq data

Usage

is_in_rnaseq(junc_id, rna_juncs)

Arguments

junc_id	vector of junction id to test
rna_juncs	a vector of junctions that were identified in RNA-seq data

Value

logical vector of same length as junc_id indicating if the input junc_id was found in RNA-seq data of the same sample

TRON-Bioinformatics/splice2neo documentation built on March 25, 2024, 2:27 a.m.