Man pages for XinleiChen001/cytofexplorer
A data analysis package for cytof users
| brewer_color_sets | 生成颜色系列 |
| cluster_expr_report | 生成各个cluster的Heatmap以及boxplot |
| cluster_marker_preview | cluster_marker_preview |
| cluster_merge | cluster_merge |
| cluster_significant_plot | cluster统计中细胞数量的质控（quality control） |
| cluster_significant_report | cluster统计中细胞数量的质控（quality control） |
| combined_stat | combined_stat 统计分析函数 |
| cytof_addToFCS_modified | cytof_addToFCS_modified |
| cytofAsinh | cytofAsinh 定义数据转化函数 |
| dif_seq_rainbow | dif_seq_rainbow |
| draw_abundance_report | 画各个Cluster Abundance的boxplot，Heatmap |
| draw_abundance_volcano | 生成Cluster Aundance的火山图 |
| draw_abundance_volcano2 | 生成Cluster Aundance的火山图 |
| draw_density_plots | draw_density_plots |
| draw_expr_heatmap | draw_expr_heatmap |
| draw_expr_heatmaps | draw_expr_heatmaps |
| draw_expr_volcano | 生成marker表达的火山图 |
| draw_expr_volcano2 | 生成marker表达的火山图 |
| draw_tsne_figs | draw_tsne_figs |
| draw_tsne_heatmaps | draw_tsne_heatmaps |
| equal_sample | equal_sample |
| ggtable | 简易表格 |
| groups2csv | groups2csv 生成所有文件的列表 |
| markers2csv | markers2csv 生成所有marker的名称列表 |
| metacluster_multi | metacluster_multi |
| One_SENSE_report | One_SENSE_report |
| PG_elbow | Elbow Test |
| remove_extremum | 去除极值 |
| simpleAsinh | Arcsinh 转化函数 |
| stat_by_cluster | Statistics of clusters(Abundance and Experssion) |
