Man pages for XinleiChen001/cytofexplorer
A data analysis package for cytof users

brewer_color_sets生成颜色系列
cluster_expr_report生成各个cluster的Heatmap以及boxplot
cluster_marker_previewcluster_marker_preview
cluster_mergecluster_merge
cluster_significant_plotcluster统计中细胞数量的质控(quality control)
cluster_significant_reportcluster统计中细胞数量的质控(quality control)
combined_statcombined_stat 统计分析函数
cytof_addToFCS_modifiedcytof_addToFCS_modified
cytofAsinhcytofAsinh 定义数据转化函数
dif_seq_rainbowdif_seq_rainbow
draw_abundance_report画各个Cluster Abundance的boxplot,Heatmap
draw_abundance_volcano生成Cluster Aundance的火山图
draw_abundance_volcano2生成Cluster Aundance的火山图
draw_density_plotsdraw_density_plots
draw_expr_heatmapdraw_expr_heatmap
draw_expr_heatmapsdraw_expr_heatmaps
draw_expr_volcano生成marker表达的火山图
draw_expr_volcano2生成marker表达的火山图
draw_tsne_figsdraw_tsne_figs
draw_tsne_heatmapsdraw_tsne_heatmaps
equal_sampleequal_sample
ggtable简易表格
groups2csvgroups2csv 生成所有文件的列表
markers2csvmarkers2csv 生成所有marker的名称列表
metacluster_multimetacluster_multi
One_SENSE_reportOne_SENSE_report
PG_elbowElbow Test
remove_extremum去除极值
simpleAsinhArcsinh 转化函数
stat_by_clusterStatistics of clusters(Abundance and Experssion)
XinleiChen001/cytofexplorer documentation built on Oct. 31, 2020, 5:59 p.m.