View source: R/selection_funks.R
readFubarTable | R Documentation |
NULL
is returned.Parses a FUBAR output table for significant posterior probabilities of a
codon being subject to positive selection. If any codons fit the criteria, a
respective table is returned, otherwise NULL
is returned.
readFubarTable(path.2.fubar.csv, family.name, sign.post.prob = 0.9)
path.2.fubar.csv |
a valid file path to the FUBAR csv file to parse |
family.name |
A string indicating the name of the gene cluster (family) subjected to the FUBAR analysis. |
sign.post.prob |
The cutoff value the posterior probabilities have to
meet ( |
An instance of base::data.frame holding the tabular FUBAR output
with just the following columns: 1. Codon, 2. Post.Prob, 3. BayesFactor, and
4. family. NULL
is returned if no codon matches the significance
criteria.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.