tree4Busted: Annotates a phylogenetic tree in such amanner that foreground...
In asishallab/GeneFamilies: Analyses different properties of gene families
View source: R/selection_funks.R
tree4Busted R Documentation
Annotates a phylogenetic tree in such amanner that foreground branches are
recognized by HYPHY's BUSTED analysis.
Description
Annotates a phylogenetic tree in such amanner that foreground branches are
recognized by HYPHY's BUSTED analysis.
Usage
tree4Busted(phylo.tree, foreground.nodes)
Arguments
phylo.tree
an instance of class ape::phylo
foreground.nodes
integer vector holding the nodes that are selected
as foreground
Value
A BUSTED annotated copy of 'phylo.tree'
Mark foreground tips / leaves:
Mark foreground inner nodes:
asishallab/GeneFamilies documentation built on July 28, 2024, 11:44 a.m.
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View source: R/selection_funks.R
| tree4Busted | R Documentation |
Annotates a phylogenetic tree in such amanner that foreground branches are recognized by HYPHY's BUSTED analysis.
Description
Annotates a phylogenetic tree in such amanner that foreground branches are recognized by HYPHY's BUSTED analysis.
Usage
tree4Busted(phylo.tree, foreground.nodes)
Arguments
phylo.tree |
an instance of class ape::phylo |
foreground.nodes |
integer vector holding the nodes that are selected as foreground |
Value
A BUSTED annotated copy of 'phylo.tree' Mark foreground tips / leaves: Mark foreground inner nodes:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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