patientSummaryToNozzleReport: Make a Nozzle report from an individual patient's results

Description Usage Arguments Value

View source: R/nozzleBuilder.R

Description

Make a Nozzle report from an individual patient's results

Usage

1
patientSummaryToNozzleReport(patSum, rootReportName, resSetName)

Arguments

patSum

The list element, including item name of the patient's summary (note this must include the patient name, thus what is given by list[1] would be correct, not what is subscripted like list[[1]])

rootReportName

The file path to the root nozzle report ex: "./output/study_mutSigAnalysisOnly/results/somatic_mutation_aberration_summary.nozzleReport"

resSetName

The name of the results set being added to the nozzle page.

Value

The path to the file that the patient summary was saved to.


biodev/packageDir documentation built on Nov. 4, 2019, 7:19 a.m.