runSomaticMutationsProcessing: Main execution function for entry of somatic mutation data,...

In biodev/packageDir: Tool for in silico functional analysis design and exploration of relation between genomic function and aberration.

Description

Implements armMain interface, providing main execution function for entry of somatic mutation data, and somatic mutations input arm of this program.

Usage

runSomaticMutationsProcessing(settings, study)

Arguments

settings	The settings list object for the somatic mutation interface, or a blank list.
study	A Study object (a defined in initiateDataStructures.R)

Value

Somatic mutations path results set

Note

This function is passed as armMain() inside the runArm() function

biodev/packageDir documentation built on Nov. 4, 2019, 7:19 a.m.