master_intersect_cna_grlist: Find intersect from list of CNA GRanges
In brucemoran/somenone: R functions required by the somenone NextFlow nf-core pipeline
master_intersect_cna_grlist R Documentation
Find intersect from list of CNA GRanges
Description
Find intersect from list of CNA GRanges
Usage
master_intersect_cna_grlist(gr_list, ps_vec, which_genome)
Arguments
ps_vec
mcols columns to keep p(er) s(ample; appended with list element's name)
which_genome
the genome assembly used, "hg19" or "hg38"
cna_list
list of named GRanges objects
Value
GRanges object of all CNA, intersecting or not
includes the ranges and each mcol from ps_vec, annotated 'ps_vec[x].sample'
brucemoran/somenone documentation built on Nov. 1, 2022, 3:56 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| master_intersect_cna_grlist | R Documentation |
Find intersect from list of CNA GRanges
Description
Find intersect from list of CNA GRanges
Usage
master_intersect_cna_grlist(gr_list, ps_vec, which_genome)
Arguments
ps_vec |
mcols columns to keep p(er) s(ample; appended with list element's name) |
which_genome |
the genome assembly used, "hg19" or "hg38" |
cna_list |
list of named GRanges objects |
Value
GRanges object of all CNA, intersecting or not includes the ranges and each mcol from ps_vec, annotated 'ps_vec[x].sample'
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.