data-raw/sequence_tags.R
In cancer-genomics/trellis: Somatic structural variant analysis
library(trellis)
data(rlist)
set.seed(123)
extdata <- system.file("extdata", package="svbams")
bamfile <- file.path(extdata, "cgov44t_revised.bam")
tags <- getSequenceOfReads(rlist, bamfile,
MAX=25L, build = "hg19")
save(tags, file="../data/tags.rda", compression_level=9)
cancer-genomics/trellis documentation built on Feb. 2, 2023, 7:04 p.m.
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library(trellis)
data(rlist)
set.seed(123)
extdata <- system.file("extdata", package="svbams")
bamfile <- file.path(extdata, "cgov44t_revised.bam")
tags <- getSequenceOfReads(rlist, bamfile,
MAX=25L, build = "hg19")
save(tags, file="../data/tags.rda", compression_level=9)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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