Files in compbiocore/qckitfastq
FASTQ Quality Control

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/GC_content.R R/RcppExports.R R/adapter_content.R R/dimensions.R R/kmer_count.R R/overrep_kmer.R R/overrep_reads.R R/per_base_quality.R R/per_read_quality.R R/plot_GC_content.R R/plot_adapter_content.R R/plot_overrep_kmer.R R/plot_overrep_reads.R R/plot_per_base_quality.R R/plot_per_read_quality.R R/plot_read_content.R R/plot_read_length.R R/rcpp.r R/read_content.R R/read_length.R R/run_all.R README.md
configure.sh
configure.win
inst/NEWS
inst/extdata/10^5_reads_test.fq.gz
inst/extdata/adapters.txt
inst/extdata/test.fq.gz
inst/extdata/throw_error.fq.gz
make.R man/GC_content.Rd man/adapter_content.Rd man/calc_adapter_content.Rd man/calc_format_score.Rd man/calc_over_rep_seq.Rd man/dimensions.Rd man/find_format.Rd man/gc_per_read.Rd man/kmer_count.Rd man/overrep_kmer.Rd man/overrep_reads.Rd man/per_base_quality.Rd man/per_read_quality.Rd man/plot_GC_content.Rd man/plot_adapter_content.Rd man/plot_outliers.Rd man/plot_overrep_kmer.Rd man/plot_overrep_reads.Rd man/plot_per_base_quality.Rd man/plot_per_read_quality.Rd man/plot_read_content.Rd man/plot_read_length.Rd man/qual_score_per_read.Rd man/read_base_content.Rd man/read_content.Rd man/read_length.Rd man/run_all.Rd
mkdocs.yml
ready.yml
response.md
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/calc_adapter_content.cpp
src/gzstream.cpp
src/gzstream.h
src/read_fastq.cpp
tests/testthat.R tests/testthat/test_adapter_content.R tests/testthat/test_dimensions.R tests/testthat/test_gc.R tests/testthat/test_kmer.R tests/testthat/test_overrep.R tests/testthat/test_qualityscore.R tests/testthat/test_read_content.R tests/testthat/test_read_fastq.R tests/testthat/test_run_all.R
vignettes/qckitfastq.bib
vignettes/vignette-qckitfastq.Rmd
compbiocore/qckitfastq documentation built on Sept. 20, 2019, 9:30 a.m.