Files in davidearn/epigrowthfit
Nonlinear Mixed Effects Models of Epidemic Growth

.Rbuildignore
DESCRIPTION
NAMESPACE
R/coef.R R/compatibility.R R/confint.R R/datetime.R R/egf.R R/egf_enum.R R/egf_eval.R R/egf_link.R R/egf_misc.R R/egf_options.R R/egf_shiny.R R/egf_tmb.R R/egf_utils.R R/epidemic.R R/extract.R R/fitted.R R/gi.R R/graphics.R R/language.R R/plot.R R/predict.R R/print.R R/prior.R R/profile.R R/simulate.R R/summary.R R/utils.R R/validity.R R/zzz.R README.md
TODO.org
data/covid19.ontario.rda
inst/NEWS.Rd
inst/scripts/covid19.ontario.R
inst/scripts/covid19.ontario.definitions.tsv
inst/shiny/toplevel/server.R inst/shiny/toplevel/ui.R inst/shiny/windowselect/server.R inst/shiny/windowselect/ui.R inst/shiny/windowselect/utils.R man/R0.Rd man/coef.egf.Rd man/confint.egf.Rd man/cov2theta.Rd man/covid19.ontario.Rd man/df.residual.egf.Rd man/egf-class.Rd man/egf.Rd man/egf_control.Rd man/egf_control_plot.Rd man/egf_has_converged.Rd man/egf_has_random.Rd man/egf_model.Rd man/egf_optimizer.Rd man/egf_parallel.Rd man/egf_prior.Rd man/egf_shiny.Rd man/egf_top.Rd man/epigrowthfit-defunct.Rd man/epigrowthfit-deprecated.Rd man/epigrowthfit-notyet.Rd man/epigrowthfit-package.Rd man/extractAIC.egf.Rd man/finalsize.Rd man/fitted.egf.Rd man/fixef.egf.Rd man/formula.egf.Rd man/getCall.egf.Rd man/gi.Rd man/logLik.egf.Rd man/model.frame.egf.Rd man/model.matrix.egf.Rd man/nobs.egf.Rd man/plot.egf.Rd man/predict.egf.Rd man/print.egf.Rd man/profile.egf.Rd man/ranef.egf.Rd man/simulate.egf.Rd man/simulate.egf_model.Rd man/summary.egf.Rd man/terms.egf.Rd man/timescale.Rd man/vcov.egf.Rd misc/sandbox/test_tmb.R
misc/sandbox/test_tmb.cpp
misc/scrap/Makefile
misc/scrap/gi.tex
misc/scrap/models.tex
misc/vignettes/Makefile
misc/vignettes/cache/__packages
misc/vignettes/cache/foo_dcce8c83810fb120cc7c818566cd8f12.rdb
misc/vignettes/cache/foo_dcce8c83810fb120cc7c818566cd8f12.rdx
misc/vignettes/knit_config.R
misc/vignettes/knit_theme.css
misc/vignettes/logo.png
misc/vignettes/model.Rnw
misc/vignettes/old/Makefile
misc/vignettes/old/epigrowthfit-vignette.Rnw
misc/vignettes/old/epigrowthfit-vignette.bib
misc/vignettes/preamble.tex
misc/world/data/Makefile
misc/world/data/augment_world_windows.R misc/world/data/make_world.R misc/world/data/make_world_weather.R misc/world/data/make_world_windows.R misc/world/data/tidy_coords.R misc/world/data/tidy_covid.R misc/world/data/tidy_devel.R misc/world/data/tidy_equity.R misc/world/data/tidy_mobility.R misc/world/data/tidy_npi.R misc/world/data/tidy_population.R misc/world/data/tidy_vaccine.R misc/world/data/utils_world_weather.R misc/world/data/utils_world_windows.R
src/Makevars
src/curve.h
src/distributions.h
src/enum.h
src/epigrowthfit.cpp
src/nll.h
src/structs.h
src/utils.h
tests/coef.R tests/confint.R tests/datetime.R tests/egf.R tests/egf_enum.R tests/egf_eval.R tests/egf_examples_day_of_week.R tests/egf_examples_excess.R tests/egf_examples_fixed.R tests/egf_examples_random.R tests/egf_link.R tests/egf_misc.R tests/egf_options.R tests/egf_utils.R tests/epidemic.R tests/extract.R tests/fitted.R tests/gi.R tests/include.R tests/language.R tests/prior.R tests/profile.R
tests/src/test.cpp
tests/summary.R tests/utils.R tests/validity.R tests/zzz.R
davidearn/epigrowthfit documentation built on Feb. 22, 2025, 12:44 p.m.