outlier_obj: Objective function of outlier part in EM step
In dcgerard/updogAlpha: Using Parental Data for Offspring Genotyping
Description
Usage
Arguments
Author(s)
Description
Objective function of outlier part in EM step
Usage
1
outlier_obj(ocounts, osize, weight_vec, out_mean, out_disp)
Arguments
ocounts
A vector of reads counts of reference allele.
osize
A vector of total reads counts.
weight_vec
The current probability of a point being an outlier.
out_mean
The current mean of the beta.
out_disp
The current overdispersion parameter of the beta.
Author(s)
David Gerard
dcgerard/updogAlpha documentation built on May 14, 2019, 3:10 a.m.
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Description Usage Arguments Author(s)
Description
Objective function of outlier part in EM step
Usage
1 | outlier_obj(ocounts, osize, weight_vec, out_mean, out_disp)
|
Arguments
ocounts |
A vector of reads counts of reference allele. |
osize |
A vector of total reads counts. |
weight_vec |
The current probability of a point being an outlier. |
out_mean |
The current mean of the beta. |
out_disp |
The current overdispersion parameter of the beta. |
Author(s)
David Gerard
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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