grLiftOver: grLiftOver
In demuellae/muRtools: Mueller's R tools
View source: R/genomicRegions.R
grLiftOver R Documentation
grLiftOver
Description
Converts coordinates of a GRanges object to target genome assembly. Wraps around rtracklayer::liftOver
and automatically downloads and selects the correct chain file
Usage
grLiftOver(gr, targetAssembly, onlyUnique = TRUE)
Arguments
gr
GRanges object to liftOver
targetAssembly
character string specifying the target assembly
Value
GRanges object with coordinates that could uniquely be
demuellae/muRtools documentation built on Sept. 8, 2023, 4:32 p.m.
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View source: R/genomicRegions.R
| grLiftOver | R Documentation |
grLiftOver
Description
Converts coordinates of a GRanges object to target genome assembly. Wraps around rtracklayer::liftOver and automatically downloads and selects the correct chain file
Usage
grLiftOver(gr, targetAssembly, onlyUnique = TRUE)
Arguments
gr |
|
targetAssembly |
character string specifying the target assembly |
Value
GRanges object with coordinates that could uniquely be
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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