Reference-class: An S4 class to represent Single-Cell RNA-seq reference

Reference-classR Documentation

An S4 class to represent Single-Cell RNA-seq reference

Description

An S4 class to represent Single-Cell RNA-seq reference

Slots

cell_types

a factor of cell type identities for each cell

counts

a sparse matrix of raw counts for each gene (rowname) and each cell (colnames or barcodes)

nUMI

an atomic vector of numeric UMI counts per cell


dmcable/RCTD documentation built on Feb. 24, 2024, 11:03 p.m.