genesbyprofilesimilarity: Find genes that have a similar expression profile to your...

Description Arguments Value

Description

Find genes that have a (glass slide) expression profile similar to that of your input gene.

Arguments

ProfileGeneId

The Gene Id

ProfileDistanceMethod

The method used to calculate the similarity distance

ProfileNumToReturn

The number of genes in the result

ProfileProfileSet

Choose the strain of the profile to search against

ProfileSearchGoal

The searching goal of the profile similarity query

ProfileTimeShift

The minimum allowed time shift

o-fields

Single valued attributes of the feature. Provide one or more values. Use comma as a delimter.

o-tables

Multi-valued attributes of the feature. Provide one or more values. Use comma as a delimter.

.convert

a logical value or a function that controls how the result of the method is returned. If this is a function, the character string or raw vector is passed to this function and it converts it appropriately. If this is a logical value and TRUE, then we attempt to convert the result based on its Content-Type returned by the Web server. If this is FALSE, the value from the Web server is returned as is.

.url

the URL for the Web request. This defaults to the correct value, but can be specified by the caller if the method is available at a different URL, e.g. locally or in a mirror server.

.json

a logical value controlling whether to use the JSON or the XML version of the method

Value

text/xml text/plain


duncantl/REuPathDB documentation built on May 15, 2019, 5:28 p.m.