Files in duncantl/REuPathDB
Interface to REST API of (EuPathDB)
.Rbuildignore
DESCRIPTION
Issues
R/AssemblyQuestions.R
R/EstQuestions.R
R/GeneQuestions.R
R/GenomicSequenceQuestions.R
R/IsolateQuestions.R
R/OrfQuestions.R
R/SageTagQuestions.R
R/SnpQuestions.R
WADL/AssembliesByEstAccession.wadl
WADL/AssembliesByGeneIDs.wadl
WADL/AssembliesByLibrary.wadl
WADL/AssembliesByLocation.wadl
WADL/AssembliesBySimilarity.wadl
WADL/AssembliesWithGeneOverlap.wadl
WADL/AssemblyQuestions.wadl
WADL/BergheiGenesByExpressionPercentile.wadl
WADL/ESTsByGeneIDs.wadl
WADL/EstBySourceId.wadl
WADL/EstQuestions.wadl
WADL/EstsByLibrary.wadl
WADL/EstsByLocation.wadl
WADL/EstsBySimilarity.wadl
WADL/EstsWithGeneOverlap.wadl
WADL/GSSBySimilarity.wadl
WADL/GeneByLocusTag.wadl
WADL/GeneQuestions.wadl
WADL/GenesByBindingSiteFeature.wadl
WADL/GenesByCentromereProximity.wadl
WADL/GenesByChIPchipPlasmo.wadl
WADL/GenesByChIPchipToxo.wadl
WADL/GenesByCowmanSir2FoldChange.wadl
WADL/GenesByCowmanSir2Percentile.wadl
WADL/GenesByDifferentialMeanExpression.wadl
WADL/GenesByEHistolyticaExpressionTiming.wadl
WADL/GenesByESTOverlap.wadl
WADL/GenesByEcNumber.wadl
WADL/GenesByExonCount.wadl
WADL/GenesByExportPrediction.wadl
WADL/GenesByExpressionPercentileA.wadl
WADL/GenesByExpressionPercentileBrucei5stg.wadl
WADL/GenesByExpressionPercentileLinfantum.wadl
WADL/GenesByExpressionPercentileTbrucei.wadl
WADL/GenesByExpressionPercentileTcruzi.wadl
WADL/GenesByExpressionTiming.wadl
WADL/GenesByExtraerythrocyticExpression.wadl
WADL/GenesByFunctionalInteraction.wadl
WADL/GenesByGametocyteExpression.wadl
WADL/GenesByGeneType.wadl
WADL/GenesByGoTerm.wadl
WADL/GenesByInterproDomain.wadl
WADL/GenesByIntraerythrocyticExpression.wadl
WADL/GenesByIsoelectricPoint.wadl
WADL/GenesByKappeFoldChange.wadl
WADL/GenesByLocation.wadl
WADL/GenesByMassSpec.wadl
WADL/GenesByMetabolicPathway.wadl
WADL/GenesByMicroArrPaGELinfantum.wadl
WADL/GenesByMicroArrPaGELinfantumPct.wadl
WADL/GenesByMicroArrPaGELmajor.wadl
WADL/GenesByMicroArrPaGELmajorPct.wadl
WADL/GenesByMicroArrPaGETbrucei.wadl
WADL/GenesByMicroArrPaGETcruzi.wadl
WADL/GenesByMicroArr_TbDRBD3.wadl
WADL/GenesByMolecularWeight.wadl
WADL/GenesByMotifSearch.wadl
WADL/GenesByMr4Reagents.wadl
WADL/GenesByNonnuclearLocation.wadl
WADL/GenesByOldAnnotation.wadl
WADL/GenesByOrthologPattern.wadl
WADL/GenesByPdbSimilarity.wadl
WADL/GenesByPhenotype.wadl
WADL/GenesByPhyleticProfile.wadl
WADL/GenesByPhylogeneticTree.wadl
WADL/GenesByProfileSimilarity.wadl
WADL/GenesByPromastigoteTimeSeries.wadl
WADL/GenesByProteinProteinInteraction.wadl
WADL/GenesByProteomicsProfile.wadl
WADL/GenesByRNASeqExpressionFoldChange.wadl
WADL/GenesByRNASeqExpressionPercentile.wadl
WADL/GenesByRNASeqExpressionTiming.wadl
WADL/GenesByRNASeqPfExpressionFoldChange.wadl
WADL/GenesByRNASeqPfRBCExprnPercentile.wadl
WADL/GenesByRNASeqPfRBCFoldChange.wadl
WADL/GenesByRingqvistFoldChange.wadl
WADL/GenesByRingqvistPercentile.wadl
WADL/GenesBySageTag.wadl
WADL/GenesBySageTagRStat.wadl
WADL/GenesBySecondaryStructure.wadl
WADL/GenesBySimilarity.wadl
WADL/GenesBySnps.wadl
WADL/GenesBySuCqPage.wadl
WADL/GenesBySuCqPercentile.wadl
WADL/GenesBySubcellularLocalization.wadl
WADL/GenesByTaxon.wadl
WADL/GenesByTbruceiTimeSeries.wadl
WADL/GenesByTelomereProximity.wadl
WADL/GenesByTextSearch.wadl
WADL/GenesByTimeSeriesFoldChangeBradyBoothroyd.wadl
WADL/GenesByTimeSeriesFoldChangeBradyFl.wadl
WADL/GenesByTimeSeriesFoldChangeBradyRoos.wadl
WADL/GenesByToxoCellCycleFoldChange.wadl
WADL/GenesByToxoCellCycleSpline.wadl
WADL/GenesByToxoProfileSimilarity.wadl
WADL/GenesByTransmembraneDomains.wadl
WADL/GenesByVivaxExpressionTiming.wadl
WADL/GenesByWatersDifferentialExpression.wadl
WADL/GenesOrthologousToAGivenGene.wadl
WADL/GenesWithEpitopes.wadl
WADL/GenesWithSignalPeptide.wadl
WADL/GenesWithStructurePrediction.wadl
WADL/GenesWithUpdatedAnnotation.wadl
WADL/GenomicSequenceQuestions.wadl
WADL/GiardiaGenesByDifferentialExpression.wadl
WADL/GiardiaGenesByDifferentialExpressionTwo.wadl
WADL/GiardiaGenesByExpressionPercentileProfile.wadl
WADL/GiardiaGenesByExpressionPercentileProfileTwo.wadl
WADL/GiardiaGenesFoldChangeTwo.wadl
WADL/IsolateByAuthor.wadl
WADL/IsolateByCountry.wadl
WADL/IsolateByGenotypeNumber.wadl
WADL/IsolateByHost.wadl
WADL/IsolateByIsolateId.wadl
WADL/IsolateByIsolationSource.wadl
WADL/IsolateByProduct.wadl
WADL/IsolateByRFLPGenotype.wadl
WADL/IsolateByStudy.wadl
WADL/IsolateByTaxon.wadl
WADL/IsolateQuestions.wadl
WADL/IsolatesBySimilarity.wadl
WADL/IsolatesByTextSearch.wadl
WADL/OrfByOrfId.wadl
WADL/OrfQuestions.wadl
WADL/OrfsByLocation.wadl
WADL/OrfsByMassSpec.wadl
WADL/OrfsByMotifSearch.wadl
WADL/OrfsBySimilarity.wadl
WADL/SageTagByExpressionLevel.wadl
WADL/SageTagByGeneSourceId.wadl
WADL/SageTagByLocation.wadl
WADL/SageTagByRStat.wadl
WADL/SageTagByRadSourceId.wadl
WADL/SageTagBySequence.wadl
WADL/SageTagQuestions.wadl
WADL/SequenceBySourceId.wadl
WADL/SequencesBySimilarity.wadl
WADL/SequencesByTaxon.wadl
WADL/SnpBySourceId.wadl
WADL/SnpQuestions.wadl
WADL/SnpsByAlleleFrequency.wadl
WADL/SnpsByGeneId.wadl
WADL/SnpsByIsolatePattern.wadl
WADL/SnpsByIsolateType.wadl
WADL/SnpsByLocation.wadl
WADL/ToxoGenesByDifferentialExpression.wadl
WADL/ToxoGenesByDifferentialExpressionChooseComparisons.wadl
WADL/ToxoGenesByDifferentialMeanExpression.wadl
WADL/ToxoGenesByExpressionPercentile.wadl
Web/GNUmakefile
Web/autom4te.cache/output.0
Web/autom4te.cache/requests
Web/autom4te.cache/traces.0
Web/config.log
Web/config.status
Web/configure
Web/index.html
Web/index.html.in
eg.R
eg2.R
generate.R
generate2.R
getWADLs.R
man/ParameterOptions.Rd
man/assembliesbyestaccession.Rd
man/assembliesbygeneids.Rd
man/assembliesbylibrary.Rd
man/assembliesbylocation.Rd
man/assembliesbysimilarity.Rd
man/assemblieswithgeneoverlap.Rd
man/bergheigenesbyexpressionpercentile.Rd
man/estbysourceid.Rd
man/estsbygeneids.Rd
man/estsbylibrary.Rd
man/estsbylocation.Rd
man/estsbysimilarity.Rd
man/estswithgeneoverlap.Rd
man/genebylocustag.Rd
man/genebysinglelocustag.Rd
man/genesbybindingsitefeature.Rd
man/genesbycentromereproximity.Rd
man/genesbychipchipplasmo.Rd
man/genesbychipchiptoxo.Rd
man/genesbycowmansir2foldchange.Rd
man/genesbycowmansir2percentile.Rd
man/genesbydifferentialmeanexpression.Rd
man/genesbyecnumber.Rd
man/genesbyehistolyticaexpressiontiming.Rd
man/genesbyestoverlap.Rd
man/genesbyexoncount.Rd
man/genesbyexportprediction.Rd
man/genesbyexpressionpercentile.Rd
man/genesbyexpressionpercentilea.Rd
man/genesbyexpressionpercentilebrucei5stg.Rd
man/genesbyexpressionpercentilelinfantum.Rd
man/genesbyexpressionpercentiletbrucei.Rd
man/genesbyexpressionpercentiletcruzi.Rd
man/genesbyexpressiontiming.Rd
man/genesbyfunctionalinteraction.Rd
man/genesbygametocyteexpression.Rd
man/genesbygametocyteexprfoldchange.Rd
man/genesbygenetype.Rd
man/genesbygoterm.Rd
man/genesbyinterprodomain.Rd
man/genesbyisoelectricpoint.Rd
man/genesbykappefoldchange.Rd
man/genesbylocation.Rd
man/genesbymassspec.Rd
man/genesbymetabolicpathway.Rd
man/genesbymicroarr_tbdrbd3.Rd
man/genesbymicroarrpagelinfantum.Rd
man/genesbymicroarrpagelinfantumpct.Rd
man/genesbymicroarrpagelmajor.Rd
man/genesbymicroarrpagelmajorpct.Rd
man/genesbymicroarrpagetbrucei.Rd
man/genesbymicroarrpagetcruzi.Rd
man/genesbymolecularweight.Rd
man/genesbymotifsearch.Rd
man/genesbymr4reagents.Rd
man/genesbynonnuclearlocation.Rd
man/genesbyoldannotation.Rd
man/genesbyorthologpattern.Rd
man/genesbypdbsimilarity.Rd
man/genesbyphenotype.Rd
man/genesbyphyleticprofile.Rd
man/genesbyphylogenetictree.Rd
man/genesbyprofilesimilarity.Rd
man/genesbypromastigotetimeseries.Rd
man/genesbyproteinproteininteraction.Rd
man/genesbyproteomicsprofile.Rd
man/genesbyringqvistfoldchange.Rd
man/genesbyringqvistpercentile.Rd
man/genesbyrnaseqexpressionfoldchange.Rd
man/genesbyrnaseqexpressionpercentile.Rd
man/genesbyrnaseqexpressiontiming.Rd
man/genesbyrnaseqpfexpressionfoldchange.Rd
man/genesbyrnaseqpfrbcexprnpercentile.Rd
man/genesbyrnaseqpfrbcfoldchange.Rd
man/genesbysagetag.Rd
man/genesbysagetagrstat.Rd
man/genesbysecondarystructure.Rd
man/genesbysimilarity.Rd
man/genesbysnps.Rd
man/genesbysubcellularlocalization.Rd
man/genesbysucqpage.Rd
man/genesbysucqpercentile.Rd
man/genesbytaxon.Rd
man/genesbytbruceitimeseries.Rd
man/genesbytelomereproximity.Rd
man/genesbytextsearch.Rd
man/genesbytgvegrnaseqexpressionfoldchange.Rd
man/genesbytgvegrnaseqexpressionpercentile.Rd
man/genesbytimeseriesfoldchangebradyboothroyd.Rd
man/genesbytimeseriesfoldchangebradyfl.Rd
man/genesbytimeseriesfoldchangebradyroos.Rd
man/genesbytoxocellcyclefoldchange.Rd
man/genesbytoxocellcyclespline.Rd
man/genesbytoxoprofilesimilarity.Rd
man/genesbytransmembranedomains.Rd
man/genesbyvivaxexpressiontiming.Rd
man/genesbywatersdifferentialexpression.Rd
man/genesorthologoustoagivengene.Rd
man/geneswithepitopes.Rd
man/geneswithsignalpeptide.Rd
man/geneswithstructureprediction.Rd
man/geneswithupdatedannotation.Rd
man/giardiagenesbydifferentialexpression.Rd
man/giardiagenesbydifferentialexpressiontwo.Rd
man/giardiagenesbyexpressionpercentileprofile.Rd
man/giardiagenesbyexpressionpercentileprofiletwo.Rd
man/giardiagenesfoldchangetwo.Rd
man/gssbysimilarity.Rd
man/isolatebyauthor.Rd
man/isolatebycountry.Rd
man/isolatebygenotypenumber.Rd
man/isolatebyhost.Rd
man/isolatebyisolateid.Rd
man/isolatebyisolationsource.Rd
man/isolatebyproduct.Rd
man/isolatebyrflpgenotype.Rd
man/isolatebystudy.Rd
man/isolatebytaxon.Rd
man/isolatesbysimilarity.Rd
man/isolatesbytextsearch.Rd
man/orfbyorfid.Rd
man/orfsbylocation.Rd
man/orfsbymassspec.Rd
man/orfsbymotifsearch.Rd
man/orfsbysimilarity.Rd
man/sagetagbyexpressionlevel.Rd
man/sagetagbygenesourceid.Rd
man/sagetagbylocation.Rd
man/sagetagbyradsourceid.Rd
man/sagetagbyrstat.Rd
man/sagetagbysequence.Rd
man/sequencebysourceid.Rd
man/sequencesbysimilarity.Rd
man/sequencesbytaxon.Rd
man/snpbysourceid.Rd
man/snpsbyallelefrequency.Rd
man/snpsbygeneid.Rd
man/snpsbyisolatepattern.Rd
man/snpsbyisolatetype.Rd
man/snpsbylocation.Rd
man/toxogenesbydifferentialexpression.Rd
man/toxogenesbydifferentialexpressionchoosecomparisons.Rd
man/toxogenesbydifferentialmeanexpression.Rd
man/toxogenesbyexpressionpercentile.Rd
sampleFun.R
test.R
