Find SNPs by chromosomal location. <br>P.f. SNP data was provided by <a href="http://plasmodb.org/plasmo/showXmlDataContent.do?name=XmlQuestions.DataSources&datasets=Su_SNPs,Broad_SNPs,sangerItGhanaSnps,sangerReichenowiSnps&title=SNPs%20Summary">Broad, NIH and WTSI</a>. <br> T.g. SNP data was provided by <a href="http://toxodb.org/toxo/showXmlDataContent.do?name=XmlQuestions.DataSources&datasets=ME49_SNPs,AmitAlignmentSnps,Lindstrom454Snps,GeneticMarkers_Sibley&title=SNPs%20Summary ">Boothroyd, Sibley, Roos, Bontell and Smith</a>.
organism |
Organism |
chromosomeOptional |
Select chromosome for a selected organism or enter genomic sequence ID. If you provide both you will get both. |
start_point |
Select the distance (in nucleotides) to the start |
end_point |
Select the nucleotide you would like to end in. Note that 0 equals the end so you can get genes right up to the end of the sequence. The default settings start = 1 and end = 0 will give you results from the entire sequence. |
snp_strain_a |
Choose a reference from the list of strains. Strains are sorted by number of SNPs in descending order. |
snp_strain_m |
Choose a comparator(s) from the list to compare to your reference. Strains are ordered by number of SNPs in descending order. Provide one or more values. Use comma as a delimter. |
o-fields |
Single valued attributes of the feature. Provide one or more values. Use comma as a delimter. |
o-tables |
Multi-valued attributes of the feature. Provide one or more values. Use comma as a delimter. |
.convert |
a logical value or a function that controls how the result of the method is returned. If this is a function, the character string or raw vector is passed to this function and it converts it appropriately. If this is a logical value and |
.url |
the URL for the Web request. This defaults to the correct value, but can be specified by the caller if the method is available at a different URL, e.g. locally or in a mirror server. |
.json |
a logical value controlling whether to use the JSON or the XML version of the method |
text/xml text/plain
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