create_GWAMA_files: Creates GWAMA formatted files

View source: R/create_GWAMA_files.R

create_GWAMA_filesR Documentation

Creates GWAMA formatted files

Description

Creates files formatted with GWAMA specifications to perform a meta-analysis with GWAMA software

Usage

create_GWAMA_files(qcpath, file, gwmodelpath, N, llowCpGs = NULL)

Arguments

qcpath

string. Path with Quality Control results (_QCData.txt files)

gwmodelpath

string. Path to store gwama meta-analisis files, all gwama files related to the same meta-analysis must be under the same path

N

number. Number of samples in model

llowCpGs

Optiona, numeric array with all CpGs with low representation in models.

filename

string. File name to formatt to use with GWAMA

Value

files with model data formatted for GWAMA


isglobal-brge/EASIER documentation built on Sept. 25, 2024, 10:50 p.m.