getAllRelativeIslandOR: Significative variable Regression for all relative positions...

In isglobal-brge/EASIER: EwAS: quality control, meta-analysIs and EnRichment

Significative variable Regression for all relative positions to island

Description

Get regression by relative positions to island position taking in to account a significative variable parameter like FDR values. This function gets all chromatin state regressions and optionally store results in a file

Usage

getAllRelativeIslandOR(
  significative,
  position,
  outputdir = ".",
  outputfile = NULL,
  plots = TRUE
)

Arguments

significative	numerical. Variable to take in to account as significative variable, could be FDR, p-value,...
position	dataframe with all relative positions to island values to perform regression
outputdir	optional string. Output path to store file with results, by default results are written in current dir
outputfile	optional string. File name to store results if no name is provided results are not written.
plots	boolean. If plot is TRUE, plot results

isglobal-brge/EASIER documentation built on Sept. 25, 2024, 10:50 p.m.