best.models.cpp | R Documentation |
Best models from a snpmpd object by cpp or maximum number of models - modification of best.models from GUESSFM by Chris Wallace
best.models.cpp(d, cpp.thr = 0.99, maxmod = NULL)
d |
snpmod object |
cpp.thr |
cumulative posterior probability threshold for selecting top models; this is ignored when maxmod is specified |
maxmod |
maximum number of top models to output; NULL by default |
list of two objects: models = data.frame of top SNP models ordered by posterior probability (PP); the PPs are re-scaled to sum to 1; old.cpp = cpp before PPs adjusted to sum to 1
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