makeNlist.rel: Sample size information needed for flashfm, when samples are...

View source: R/Neffective.R

makeNlist.relR Documentation

Sample size information needed for flashfm, when samples are related and have effective sample sizes for each trait

Description

Sample size information needed for flashfm, when samples are related and have effective sample sizes for each trait

Usage

makeNlist.rel(Ne, y = NULL, Nsame = NULL)

Arguments

Ne

vector or trait effective sample sizes

y

if available, matrix of trait measurements or indicators of non-NA trait measurements (all samples, not just unrelated);columns are traits; used to get joint sample counts; default is NULL and if not provided an approximation is used based on vector of trait sample sizes

Nsame

a single sample size that is the same for all traits

Value

list of 4 components: N = number of individuals with all traits measured; Nqq=matrix of all pair-wise counts of number of individuals with both traits in a pair measured; Nq3 = vector of counts of number of individuals with three traits measured; all triples considered; NULL if M < 4 Nq4 = vector of counts of number of individuals with four traits measured; all quadruples considered; NULL if M < 5

Author(s)

Jenn Asimit


jennasimit/flashfm documentation built on July 31, 2022, 7:32 p.m.