makeNlist: Sample size information needed for flashfm

In jennasimit/flashfm: flexible and shared information fine-mapping

Sample size information needed for flashfm

Description

Sample size information needed for flashfm

Usage

makeNlist(Nall, y = NULL, Nsame = NULL)

Arguments

Nall	vector of sample sizes for each trait
y	if avaialable, matrix of trait measurements or indicators of non-NA trait measurements (columns are traits); used to get joint sample counts; default is NULL and if not provided an approximation is used based on vector of trait sample sizes
Nsame	a single sample size that is the same for all traits

Value

list of 4 components: N = number of individuals with all traits measured; Nqq=matrix of all pair-wise counts of number of individuals with both traits in a pair measured; Nq3 = vector of counts of number of individuals with three traits measured; all triples considered; NULL if M < 4 Nq4 = vector of counts of number of individuals with four traits measured; all quadruples considered; NULL if M < 5

Author(s)

Jenn Asimit

jennasimit/flashfm documentation built on July 31, 2022, 7:32 p.m.