Files in jennasimit/flashfm

flexible and shared information fine-mapping

.DS_Store

.Rbuildignore

.Rhistory

.gitignore

DESCRIPTION

NAMESPACE

NEWS.md

R/.DS_Store

R/FLASHFMwithFINEMAP.R R/FMconfig.R R/FMtables.R R/GUESSFMfn.R R/JAMmain.input.R R/JAMupdate.R R/N.R R/Neffective.R R/RcppExports.R R/X.R R/beta.R R/covY.R R/cvs.R R/flashfm-package.R R/flashfm.R R/fm.R R/fm2.R R/group.multi.R R/gwas.list.R R/jamexpanded.corX.R R/prep.R R/raf.R R/snpinfo.R R/summarise.R R/ybar.R README.Rmd README.md

data/FMconfig.rda

data/JAMmain.input.rda

data/N.rda

data/X.rda

data/beta.rda

data/covY.rda

data/cvs.rda

data/fm.rda

data/fm2.rda

data/gwas.list.rda

data/raf.rda

data/snpinfo.rda

data/ybar.rda

docs/404.html

docs/articles/flashfm.html

docs/articles/flashfm_files/anchor-sections-1.0/anchor-sections.css

docs/articles/flashfm_files/anchor-sections-1.0/anchor-sections.js

docs/articles/flashfm_files/header-attrs-2.5/header-attrs.js

docs/articles/index.html

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/FLASHFMwithFINEMAP.html

docs/reference/FLASHFMwithJAM.html

docs/reference/FLASHFMwithJAMhat.html

docs/reference/FMconfig.html

docs/reference/FMtables.html

docs/reference/JAM_PointEstimates.html

docs/reference/JAM_PointEstimates_Xcov.html

docs/reference/JAMexpanded.multi.html

docs/reference/JAMexpandedCor.multi.html

docs/reference/JAMexpandedCor.multi2.html

docs/reference/JAMmain.input.html

docs/reference/N.html

docs/reference/Neff.html

docs/reference/PPsummarise.html

docs/reference/Sxy.hat.html

docs/reference/Vres.all.html

docs/reference/Vres.hat.html

docs/reference/Vx.hat.html

docs/reference/X.html

docs/reference/accessors.html

docs/reference/allC12.html

docs/reference/allcredsets.html

docs/reference/best.models.cpp.html

docs/reference/best.snps.html

docs/reference/beta.html

docs/reference/calc.maxmin.html

docs/reference/calcABF.html

docs/reference/calcAdjPP.html

docs/reference/calcCres12.html

docs/reference/calcD12.html

docs/reference/calcDcon.html

docs/reference/calcQ12.html

docs/reference/conversion.html

docs/reference/cor.refdata.fn.html

docs/reference/cor2cov.html

docs/reference/covY.html

docs/reference/credset.html

docs/reference/cvs.html

docs/reference/expand.mod.html

docs/reference/finemap.html

docs/reference/flashfm.html

docs/reference/flashfm.input.html

docs/reference/fm.html

docs/reference/fm2.html

docs/reference/groupIDs.fn.html

docs/reference/groupmulti.html

docs/reference/groups-class.html

docs/reference/groups-subset.html

docs/reference/gwas.list.html

docs/reference/index.html

docs/reference/logsum.html

docs/reference/makeNlist.html

docs/reference/makeNlist.rel.html

docs/reference/makeSNPgroups.html

docs/reference/makeSNPgroups2.html

docs/reference/makemod.html

docs/reference/makeplink.html

docs/reference/marg.snps.html

docs/reference/marg.snps.vecs.html

docs/reference/marginalpp.html

docs/reference/mod.fn.html

docs/reference/multibeta.html

docs/reference/overlap.html

docs/reference/ppnsnp-class.html

docs/reference/prune_maximal.html

docs/reference/raf.html

docs/reference/refdata.fn.html

docs/reference/score2alleles.html

docs/reference/show-methods.html

docs/reference/snpin.html

docs/reference/snpinfo.html

docs/reference/snpmod-class.html

docs/reference/snppicker-class.html

docs/reference/summary.html

docs/reference/summaryStats.html

docs/reference/tag.html

docs/reference/tagexpand.mod.html

docs/reference/tags-class.html

docs/reference/union.html

docs/reference/ybar.html

man/FLASHFMwithFINEMAP.Rd man/FLASHFMwithJAM.Rd man/FLASHFMwithJAMhat.Rd man/FMconfig.Rd man/FMtables.Rd man/JAM_PointEstimates.Rd man/JAM_PointEstimates_Xcov.Rd man/JAMexpanded.multi.Rd man/JAMexpandedCor.multi.Rd man/JAMexpandedCor.multi2.Rd man/JAMmain.input.Rd man/N.Rd man/Neff.Rd man/PPsummarise.Rd man/Sxy.hat.Rd man/Vres.all.Rd man/Vres.hat.Rd man/Vx.hat.Rd man/X.Rd man/accessors.Rd man/allC12.Rd man/allcredsets.Rd man/best.models.cpp.Rd man/best.snps.Rd man/beta.Rd man/calc.maxmin.Rd man/calcABF.Rd man/calcAdjPP.Rd man/calcCres12.Rd man/calcD12.Rd man/calcDcon.Rd man/calcQ12.Rd man/conversion.Rd man/cor.refdata.fn.Rd man/cor2cov.Rd man/covY.Rd man/credset.Rd man/cvs.Rd man/expand.mod.Rd man/finemap.Rd man/flashfm.Rd man/flashfm.input.Rd man/fm.Rd man/fm2.Rd man/groupIDs.fn.Rd man/groupmulti.Rd man/groups-class.Rd man/groups-subset.Rd man/gwas.list.Rd man/logsum.Rd man/makeNlist.Rd man/makeNlist.rel.Rd man/makeSNPgroups.Rd man/makeSNPgroups2.Rd man/makemod.Rd man/makeplink.Rd man/marg.snps.Rd man/marg.snps.vecs.Rd man/marginalpp.Rd man/mod.fn.Rd man/multibeta.Rd man/overlap.Rd man/ppnsnp-class.Rd man/prune_maximal.Rd man/raf.Rd man/refdata.fn.Rd man/score2alleles.Rd man/show-methods.Rd man/snpin.Rd man/snpinfo.Rd man/snpmod-class.Rd man/snppicker-class.Rd man/summary.Rd man/summaryStats.Rd man/tag.Rd man/tagexpand.mod.Rd man/tags-class.Rd man/union.Rd man/ybar.Rd

src/.DS_Store

src/.gitignore

src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/kappa.cpp

src/margPPadj.cpp

vignettes/.gitignore

vignettes/flashfm.Rmd

jennasimit/flashfm documentation built on July 31, 2022, 7:32 p.m.