PPsummarise | R Documentation |
Summarise PP and MPP results from single-trait fine-mapping and flashfm, by SNP and by SNP group
PPsummarise(fm.multi, snpGroups, minPP = 0.05)
fm.multi |
output from flashfm function |
snpGroups |
list of two sets of snp groups; output from makeSNPgroups2 |
minPP |
a single value such that output for groups consists of group models where PP > minPP for at least one set of fine-mapping results; default is 0.05 |
a list of 4 objects: MPP lists trait-specific PP of SNP inclusion in a model; MPPg lists trait-specific PP of SNP group inclusion in a model; PP lists trait-specific model PP; PPg lists trait-specific model PP in terms of SNP group
Jenn Asimit
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.