refdata.fn: Thin genotype matrix for JAM input
In jennasimit/flashfm: flexible and shared information fine-mapping
refdata.fn R Documentation
Thin genotype matrix for JAM input
Description
Thin genotype matrix for JAM input
Usage
refdata.fn(X, r2 = 0.99)
Arguments
X
matrix of genotypes scores: SNPs are columns, individuals are rows; could be dosages
r2
r.squared threshold for thinning SNPs
Value
genotype matrix of SNPs thinned at r2 and with colinearity removed
Author(s)
Jenn Asimit
jennasimit/flashfm documentation built on July 31, 2022, 7:32 p.m.
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| refdata.fn | R Documentation |
Thin genotype matrix for JAM input
Description
Thin genotype matrix for JAM input
Usage
refdata.fn(X, r2 = 0.99)
Arguments
X |
matrix of genotypes scores: SNPs are columns, individuals are rows; could be dosages |
r2 |
r.squared threshold for thinning SNPs |
Value
genotype matrix of SNPs thinned at r2 and with colinearity removed
Author(s)
Jenn Asimit
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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