scanTabixDataFrame: A general function to quickly import tabix indexed...
In kauralasoo/eQTLUtils:
scanTabixDataFrame R Documentation
A general function to quickly import tabix indexed tab-separated files into data_frame
Description
A general function to quickly import tabix indexed tab-separated files into data_frame
Usage
scanTabixDataFrame(tabix_file, param, ...)
Arguments
tabix_file
Path to tabix-indexed text file
param
An instance of GRanges, RangedData, or RangesList
provide the sequence names and regions to be parsed. Passed onto Rsamtools::scanTabix()
...
Additional parameters to be passed on to readr::read_delim()
Value
List of data_frames, one for each entry in the param GRanges object.
kauralasoo/eQTLUtils documentation built on March 12, 2023, 8:50 p.m.
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| scanTabixDataFrame | R Documentation |
A general function to quickly import tabix indexed tab-separated files into data_frame
Description
A general function to quickly import tabix indexed tab-separated files into data_frame
Usage
scanTabixDataFrame(tabix_file, param, ...)
Arguments
tabix_file |
Path to tabix-indexed text file |
param |
An instance of GRanges, RangedData, or RangesList provide the sequence names and regions to be parsed. Passed onto Rsamtools::scanTabix() |
... |
Additional parameters to be passed on to readr::read_delim() |
Value
List of data_frames, one for each entry in the param GRanges object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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