scanTabixDataFrame: A general function to quickly import tabix indexed...

Description Usage Arguments Value

View source: R/import_data.R

Description

A general function to quickly import tabix indexed tab-separated files into data_frame

Usage

1
scanTabixDataFrame(tabix_file, param, ...)

Arguments

tabix_file

Path to tabix-indexed text file

param

A instance of GRanges, RangedData, or RangesList provide the sequence names and regions to be parsed. Passed onto Rsamtools::scanTabix()

...

Additional parameters to be passed on to readr::read_delim()

Value

List of data_frames, one for each entry in the param GRanges object.


kauralasoo/seqUtils documentation built on May 20, 2019, 7:42 a.m.