wiggleplotrConstructMetadata: Construct metadata data frame for wiggleplotr
In kauralasoo/seqUtils:
Description
Usage
Arguments
Value
View source: R/qtl_makePlots.R
Description
Construct metadata data frame for wiggleplotr
Usage
1
2
3
wiggleplotrConstructMetadata(count_matrix, sample_metadata, bigWig_dir,
bigWig_suffix = ".bw", condition_name_levels = c("naive", "IFNg",
"SL1344", "IFNg_SL1344"))
Arguments
count_matrix
Feature count matrix used to for calculating library size
sample_metadata
Sample metadata matrix (required columns: sample_id, genotype_id, condition_name)
bigWig_dir
Path to the directory with bigWig files
condition_name_levels
Levels of the condition name factor
Value
Wiggleplotr metadata data frame
kauralasoo/seqUtils documentation built on May 20, 2019, 7:42 a.m.
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Description Usage Arguments Value
View source: R/qtl_makePlots.R
Description
Construct metadata data frame for wiggleplotr
Usage
1 2 3 | wiggleplotrConstructMetadata(count_matrix, sample_metadata, bigWig_dir,
bigWig_suffix = ".bw", condition_name_levels = c("naive", "IFNg",
"SL1344", "IFNg_SL1344"))
|
Arguments
count_matrix |
Feature count matrix used to for calculating library size |
sample_metadata |
Sample metadata matrix (required columns: sample_id, genotype_id, condition_name) |
bigWig_dir |
Path to the directory with bigWig files |
condition_name_levels |
Levels of the condition name factor |
Value
Wiggleplotr metadata data frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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