Files in libcell/deconvBench
A tool for approaches evaluation of cell fraction estimation
.DS_Store
.Rbuildignore
.Rprofile
.gitattributes
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/.DS_Store
R/ADAPTS.R
R/Abis.R
R/Autogenes.R
R/Bayice.R
R/BisqueRNA.R
R/Bseqsc.R
R/Cdseq.R
R/Cdseq_no.R
R/Cibersort.R
R/Consensustme.R
R/DCQ.R
R/DWLS.R
R/Demixt.R
R/Distinguisher.R
R/Dtangle.R
R/Dtd.R
R/EPIC.R
R/Enigma.R
R/Estimate.R
R/Fardeep.R
R/Gedit.R
R/MCPcounter.R
R/MIXTURE.R
R/Momf.R
R/Music.R
R/NITUMID.R
R/Prede.R
R/SSgsea.R
R/ScbioCPM.R
R/Scdc.R
R/Singscore.R
R/TICPE.R
R/TIMER.R
R/TOAST.R
R/Toast_no.R
R/Xcell.R
R/container_deconvolution.R
R/data.R
R/debCAM.R
R/estimateCellTypeProportions.R
R/quanTIseq.R
R/sayHello.R
R/test.R
R/zzz.R
README.md
data/.DS_Store
data/Abis_refarray.rda
data/Abis_refseq.rda
data/Bulk_GSE60424.rda
data/CDSeqLength.rda
data/LM22.rda
data/Label_GSE60424.rda
data/SC_GSE60424.rda
data/TIL10.rda
deconvBench.Rproj
inst/.DS_Store
inst/extdata/.DS_Store
inst/extdata/PanglaoDB_markers_27_Mar_2020.tsv
inst/extdata/c8.all.v7.4.symbols.gmt
inst/extdata/deconvBench.eg.sqlite
inst/extdata/deconvBench.sc.sqlite
inst/extdata/genes.txt
inst/extdata/probesets.txt
inst/python/.DS_Store
inst/python/rpytools/.DS_Store
inst/python/rpytools/Autogenes.py
inst/python/rpytools/GEDIT/.DS_Store
inst/python/rpytools/GEDIT/GEDIT2.py
inst/python/rpytools/GEDIT/HandleInput.py
inst/python/rpytools/GEDIT/MatrixTools.py
inst/python/rpytools/GEDIT/getSigGenesModal.py
man/Abis.Rd
man/Abis_refarray.Rd
man/Abis_refseq.Rd
man/Adapts.Rd
man/Autogenes.Rd
man/Bayice.Rd
man/Bisquerna.Rd
man/Bseqsc.Rd
man/Bulk_GSE60424.Rd
man/CDSeqLength.Rd
man/Cdseq.Rd
man/Cibersort.Rd
man/Consensustme.Rd
man/CoreAlg.Rd
man/Dcq.Rd
man/Demixt.Rd
man/Distinguisher.Rd
man/Dtangle.Rd
man/Dtd.Rd
man/Dwls.Rd
man/Enigma.Rd
man/Epic.Rd
man/Estimate.Rd
man/Fardeep.Rd
man/Gedit.Rd
man/LM22.Rd
man/Label_GSE60424.Rd
man/MCPcounter.Rd
man/Mixture.Rd
man/Momf.Rd
man/Music.Rd
man/Nitumid.Rd
man/Prede.Rd
man/Quantiseq.Rd
man/SC_GSE60424.Rd
man/SSgsea.Rd
man/ScbioCPM.Rd
man/Scdc.Rd
man/Singscore.Rd
man/TIL10.Rd
man/Ticpe.Rd
man/Timer.Rd
man/Toast.Rd
man/Toast_no.Rd
man/Xcell.Rd
man/cdseq_no.Rd
man/debCAM.Rd
man/doPerm.Rd
man/estimateCellTypeProportions.Rd
renv.lock
renv/.DS_Store
renv/.gitignore
renv/activate.R
renv/settings.dcf
tests/testthat.R
tests/testthat/test-sayHello.R
vignettes/.gitignore
vignettes/deconvBench.Rmd
