Ticpe: Deconvolution Methods of TICPE TICPE helps users to Estimate...
In libcell/deconvBench: A tool for approaches evaluation of cell fraction estimation
Ticpe R Documentation
Deconvolution Methods of TICPE
TICPE helps users to Estimate of cellular fractions by three references
for cell type deconvolution.
Description
Deconvolution Methods of TICPE
TICPE helps users to Estimate of cellular fractions by three references
for cell type deconvolution.
Usage
Ticpe(bulkdata, tumortype = "CRC")
Arguments
bulkdata
A matrix with genes in rows and samples in columns.
tumortype
one of four methods, inclusd of "CRC", "lung","SKCM".
Value
Mixed cell composition estimation ratio data frame.
Examples
Bulk <- Bulk_GSE60424
res <- Ticpe (bulkdata=Bulk,
tumortype = "CRC")
libcell/deconvBench documentation built on Sept. 24, 2022, 12:36 p.m.
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| Ticpe | R Documentation |
Deconvolution Methods of TICPE TICPE helps users to Estimate of cellular fractions by three references for cell type deconvolution.
Description
Deconvolution Methods of TICPE TICPE helps users to Estimate of cellular fractions by three references for cell type deconvolution.
Usage
Ticpe(bulkdata, tumortype = "CRC")
Arguments
bulkdata |
A matrix with genes in rows and samples in columns. |
tumortype |
one of four methods, inclusd of "CRC", "lung","SKCM". |
Value
Mixed cell composition estimation ratio data frame.
Examples
Bulk <- Bulk_GSE60424
res <- Ticpe (bulkdata=Bulk,
tumortype = "CRC")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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