Music: Title
In libcell/deconvBench: A tool for approaches evaluation of cell fraction estimation
Music R Documentation
Title
Description
Title
Usage
Music(scdata, bulkdata, label, SubMethod = "weighted")
Arguments
scdata
single data with genes in rows and cells in columns.
bulkdata
A matrix with genes in rows and samples in columns.
label
The cell type label of single data.
SubMethod
the methods type "nnls","weighted".
Value
A data frame of Mixed cellular fractions.
Examples
# Bulk <- Bulk_GSE60424
# SC <- SC_GSE60424
# Label <- Label_GSE60424$Label
# res <- Music(bulkdata = Bulk,
# scdata = SC,
# label = Label,
# SubMethod = "weighted")
libcell/deconvBench documentation built on Sept. 24, 2022, 12:36 p.m.
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| Music | R Documentation |
Title
Description
Title
Usage
Music(scdata, bulkdata, label, SubMethod = "weighted")
Arguments
scdata |
single data with genes in rows and cells in columns. |
bulkdata |
A matrix with genes in rows and samples in columns. |
label |
The cell type label of single data. |
SubMethod |
the methods type "nnls","weighted". |
Value
A data frame of Mixed cellular fractions.
Examples
# Bulk <- Bulk_GSE60424 # SC <- SC_GSE60424 # Label <- Label_GSE60424$Label # res <- Music(bulkdata = Bulk, # scdata = SC, # label = Label, # SubMethod = "weighted")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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