SSgsea: Title

In libcell/deconvBench: A tool for approaches evaluation of cell fraction estimation

Title

Description

Title

Usage

Ssgsea(bulkdata, tissue)

Arguments

bulkdata	A matrix with genes in rows and samples in columns.
tissue	One of "BLOOD","LIVER","LUNG","MUSCLE","OVARY","HEART","BONE", "ESOPHAGUS","STOMACH","GASTRIC","PANCREAS","CEREBELLUM", "NEUROTYPES","RETINA","EYE","THYMUS","INTESTINE","ADRENAL", "ESOPHAGEAL","DUODENAL","OLFACTORY","CEREBRUM".

Value

A data frame of Mixed cellular fractions.

Examples

 Bulk <- Bulk_GSE60424
 res <- Ssgsea(bulkdata = Bulk,
               tissue = "BLOOD")

libcell/deconvBench documentation built on Sept. 24, 2022, 12:36 p.m.