Singscore: singscore
In libcell/deconvBench: A tool for approaches evaluation of cell fraction estimation
Singscore R Documentation
singscore
Description
singscore
Usage
Singscore(bulkdata, tissue)
Arguments
bulkdata
A matrix with genes in rows and samples in columns.
tissue
One of "BLOOD","LIVER","LUNG","MUSCLE","OVARY","HEART","BONE",
"ESOPHAGUS","STOMACH","GASTRIC","PANCREAS","CEREBELLUM",
"NEUROTYPES","RETINA","EYE","THYMUS","INTESTINE","ADRENAL",
"ESOPHAGEAL","DUODENAL","OLFACTORY","CEREBRUM".
Value
A data frame of Mixed cellular fractions.
Examples
Bulk <- Bulk_GSE60424
res <- Singscore(bulkdata = Bulk,
tissue = "BLOOD")
libcell/deconvBench documentation built on Sept. 24, 2022, 12:36 p.m.
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| Singscore | R Documentation |
singscore
Description
singscore
Usage
Singscore(bulkdata, tissue)
Arguments
bulkdata |
A matrix with genes in rows and samples in columns. |
tissue |
One of "BLOOD","LIVER","LUNG","MUSCLE","OVARY","HEART","BONE", "ESOPHAGUS","STOMACH","GASTRIC","PANCREAS","CEREBELLUM", "NEUROTYPES","RETINA","EYE","THYMUS","INTESTINE","ADRENAL", "ESOPHAGEAL","DUODENAL","OLFACTORY","CEREBRUM". |
Value
A data frame of Mixed cellular fractions.
Examples
Bulk <- Bulk_GSE60424
res <- Singscore(bulkdata = Bulk,
tissue = "BLOOD")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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