Toast: Deconvolution Methods of TOAST
In libcell/deconvBench: A tool for approaches evaluation of cell fraction estimation
Toast R Documentation
Deconvolution Methods of TOAST
Description
Deconvolution Methods of TOAST
Usage
Toast(signature, bulkdata)
Arguments
signature
A data-frame containing signatures of different cell types.
bulkdata
A matrix with genes in rows and samples in columns.
Value
A data frame of Mixed cellular fractions.
Examples
Bulk <- Bulk_GSE60424
res <- Toast(bulkdata = Bulk,
signature = LM22)
libcell/deconvBench documentation built on Sept. 24, 2022, 12:36 p.m.
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| Toast | R Documentation |
Deconvolution Methods of TOAST
Description
Deconvolution Methods of TOAST
Usage
Toast(signature, bulkdata)
Arguments
signature |
A data-frame containing signatures of different cell types. |
bulkdata |
A matrix with genes in rows and samples in columns. |
Value
A data frame of Mixed cellular fractions.
Examples
Bulk <- Bulk_GSE60424
res <- Toast(bulkdata = Bulk,
signature = LM22)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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