Man pages for libcell/deconvBench
A tool for approaches evaluation of cell fraction estimation
| Abis | Deconvolution Methods of ABIS The ABIS helps users to... |
| Abis_refarray | A validated of PBMC from healthy donors signature microarray... |
| Abis_refseq | A validated of PBMC from healthy donors signature RNA-seq... |
| Adapts | Deconvolution Methods of ADAPTS |
| Autogenes | #' Autogenes |
| Bayice | BayICE |
| Bisquerna | Title |
| Bseqsc | BseqSC |
| Bulk_GSE60424 | A Bulk data of GEO database GSE60424 |
| Cdseq | The deconvolution methods of CDseq |
| CDSeqLength | A gene length data useing in CDSeq methods |
| cdseq_no | CDseq no reference |
| Cibersort | Main functions |
| Consensustme | ConsensusTME |
| CoreAlg | CoreAlg |
| Dcq | DCQ |
| debCAM | debCAM |
| Demixt | Title |
| Distinguisher | Title |
| doPerm | doPerm |
| Dtangle | Dtangle |
| Dtd | DTD |
| Dwls | Title |
| Enigma | Title |
| Epic | Deconvolution Methods of EPIC EPIC helps users to Estimate of... |
| Estimate | Estimate |
| estimateCellTypeProportions | estimateCellTypeProportions Deconvolution methods for large... |
| Fardeep | FARDEEP FARDEEP helps users to Estimate of cellular fractions |
| Gedit | Gedit #' Title |
| Label_GSE60424 | A label data of GEO database GSE60424 |
| LM22 | A validated leukocyte gene signature matrix, LM22 |
| MCPcounter | Enrichment score Methods of MCPcounter |
| Mixture | Deconvolution Methods MIXTURE MIXTURE helps users to Estimate... |
| Momf | The mehod of MOMF |
| Music | Title |
| Nitumid | Deconvolution Methods NITUMID NITUMID helps users to Estimate... |
| Prede | PREDE |
| Quantiseq | Deconvolution Methods QuanTIseq QuanTIseq helps users to... |
| ScbioCPM | Title |
| Scdc | SCDC |
| SC_GSE60424 | A single data of GEO database GSE60424 |
| Singscore | singscore |
| SSgsea | Title |
| Ticpe | Deconvolution Methods of TICPE TICPE helps users to Estimate... |
| TIL10 | Human tumour immune environment signature matrix form... |
| Timer | Deconvolution Methods of TIMER TICPE helps users to Estimate... |
| Toast | Deconvolution Methods of TOAST |
| Toast_no | TOAST no reference |
| Xcell | Deconvolution Methods of xCell |
