API for mariiabilous/SuperCellBM
| Global functions | |
|---|---|
| GO_match_summary | Man page Source code |
| GO_match_top_cor_genes | Man page Source code |
| Graph_to_igraph | Man page Source code |
| SCBM_saveplot | Man page Source code |
| SC_from_membership | Man page Source code |
| SCimple2Metacell | Man page Source code |
| SCimple2Random | Man page Source code |
| SCimple2Subsampling | Man page Source code |
| add_cor_pval | Man page Source code |
| all_gene_cor | Man page Source code |
| all_gene_cor_with_pval | Man page Source code |
| annotate_supercells_to_cluster | Man page Source code |
| bind_by_graining_level | Man page Source code |
| bind_by_method | Man page Source code |
| bind_by_seed | Man page Source code |
| build_MC | Man page Source code |
| compute_DEA_GT_bool | Man page Source code |
| compute_alternative_SC | Man page Source code |
| compute_alternative_clustering | Man page Source code |
| compute_consistency_of_supercell_DEA | Man page Source code |
| compute_consistency_of_supercell_clustering | Man page Source code |
| compute_consistency_of_supercell_optimal_clustering | Man page Source code |
| compute_singglecell_DEA | Man page Source code |
| compute_singlecell_silh | Man page Source code |
| compute_singlecell_unweighted_clustering | Man page Source code |
| compute_supercells | Man page Source code |
| compute_supercells_DEA | Man page Source code |
| compute_supercells_GE | Man page Source code |
| compute_supercells_PCA | Man page Source code |
| compute_supercells_additional_gammas | Man page Source code |
| compute_supercells_additional_seeds | Man page Source code |
| compute_supercells_clustering | Man page Source code |
| compute_supercells_metacells | Man page Source code |
| compute_supercells_metacells_with_min_mc_size | Man page Source code |
| compute_supercells_silhouette | Man page Source code |
| compute_supercells_specific_method | Source code |
| compute_supercells_unweighted_clustering | Man page Source code |
| diag_consistency_mtrx | Man page Source code |
| get_GO | Man page Source code |
| get_SC_by_gamma | Man page Source code |
| get_actual_gammas_metacell | Man page Source code |
| hello | Man page |
| init_mc | Man page Source code |
| map_clustering_to_cell_type | Man page Source code |
| mc_build_cgraph | Man page Source code |
| mc_build_mc | Man page Source code |
| plot_DEA_consistency | Man page Source code |
| plot_GO_match_score | Man page Source code |
| plot_annotation_purity | Man page Source code |
| plot_argmax_silh | Man page Source code |
| plot_argmax_silh_alt_clusterings | Man page |
| plot_clustering_consistency | Man page Source code |
| plot_legend_celltype | Man page Source code |
| plot_supercell_coverage_distribution | Source code |
| plot_supercell_size_distribution | Man page Source code |
| rank_gene_gene_cor | Man page Source code |
| remove_mc_fields | Man page Source code |
