ISS_filter: Filter ISS data based on poisson distibution
In mashranga/MolDia: Single cell In-Situ sequencing (ISS) data analysis

Description Usage Arguments Value Examples

This function estimate the probabity of number of reads per cell in a specific range with desired mean (Rate or number or reads per cell) by Poisson distibution. By default current fuction calculate the mean from data.

1	ISS_filter(data, data_mean = NULL)

`data`	Input data in class MolDiaISS. Output of readISS
`data_mean`	Expected mean of number of reads press cell. Default is NULL. See details.

Number of reads with peobability

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data_1 <- readISS(file = system.file("extdata", "CellBlobs_QT_0.35.csv", package="MolDia"),
                  cellid = "CellID", , centX = "centroidX", centY = "centroidY")
res    <- ISS_filter(data = data_1, data_mean = 10)