ISS_sumstat: Calculate summary statstics of data

In mashranga/MolDia: Single cell In-Situ sequencing (ISS) data analysis

Description

Calculate summary statstics (Total reads, Total number of gene present and Gene present in group) of data

Usage

ISS_sumstat(data, gene, stat = "sum")

Arguments

data	Data in dataframe class.
gene	Object in vector or list formate. In list formated input every list element is a group of interested genes.
stat	Mode of operation. Possible value is "sum", "gene" and "present". Default is "sum".

Value

Output will be in dataframe class with a extra column names "total_reads" which is the total number of reads in each cells.

mashranga/MolDia documentation built on May 26, 2019, 9:36 a.m.