ISS_genesSummary: Summary of specific gene of interest in ISS data
In mashranga/MolDia: Single cell In-Situ sequencing (ISS) data analysis
Description
Usage
Arguments
Value
Examples
View source: R/3.3_ISS_genesSummary.R
Description
Summary of specific gene of interest of RCA data
Usage
1
ISS_genesSummary(data, gene = NULL)
Arguments
data
Input data in class MolDiaISS. Output of readISS
gene
gene of interest
Value
Barplot
Examples
1
2
3
ex_data <- readISS(file = system.file("extdata", "CellBlobs_QT_0.35.csv", package="MolDia"),
cellid = "CellID", centX ="centroidX", centY="centroidY" )
res <- ISS_genesSummary(data = ex_data, gene = "Actb.L")
mashranga/MolDia documentation built on May 26, 2019, 9:36 a.m.
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Description Usage Arguments Value Examples
View source: R/3.3_ISS_genesSummary.R
Description
Summary of specific gene of interest of RCA data
Usage
1 | ISS_genesSummary(data, gene = NULL)
|
Arguments
data |
Input data in class MolDiaISS. Output of readISS |
gene |
gene of interest |
Value
Barplot
Examples
1 2 3 | ex_data <- readISS(file = system.file("extdata", "CellBlobs_QT_0.35.csv", package="MolDia"),
cellid = "CellID", centX ="centroidX", centY="centroidY" )
res <- ISS_genesSummary(data = ex_data, gene = "Actb.L")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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