Description Usage Arguments Examples
View source: R/cluster_functions.R
Finds the genes which belong to common singleton clusters in two different clustered datasets.
1 | CommonSingletonFinder(cluster.dataset1, cluster.dataset2)
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cluster.dataset1 |
A transcriptomics dataset where the final column details the cluster the gene belongs to. First column should be gene names. All remaining columns should be expression levels. |
cluster.dataset2 |
A transcriptomics dataset in the same format as cluster.dataset1 but generated via a different clustering method or with different parameters. |
1 2 3 | pam.df <- PamClustering(Laurasmappings, k = 10)
hclust.df <- AgglomClustering(Laurasmappings, k = 10)
common.singletons <- CommonSingletonFinder(pam.df, hclust.df)
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