CytoscapeFile: CytoscapeFile:
In nathansam/CircadianTools: Collection of Tools for Detecting Rhythmic Genes
Description
Usage
Arguments
Value
Examples
View source: R/cytoscape_functions.R
Description
Converts a correlation dataframe object into a format suitable
for cytoscape and saves as a csv file.
Usage
1
CytoscapeFile(cor.dataset, save = TRUE, filename = NULL, nthreads = NULL)
Arguments
cor.dataset
A NxN dataframe of correlation values created by
CorAnalysisDataset or CorAnalysisClusterDataset
save
Logical. If TRUE then the dataframe will be saved as a csv file.
filename
String. The name for the saved file.
nthreads
Number of processor threads for the process. If not specified
then the maximum number of logical cores are used.
Value
Dataframe object in the new format.
Examples
1
2
correlation.df <- CorAnalysisDataset(Laurasmappings, nthreads = 2)
CytoscapeFile(correlation.df, nthreads = 2)
nathansam/CircadianTools documentation built on Dec. 26, 2019, 11:30 a.m.
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Description Usage Arguments Value Examples
View source: R/cytoscape_functions.R
Description
Converts a correlation dataframe object into a format suitable for cytoscape and saves as a csv file.
Usage
1 | CytoscapeFile(cor.dataset, save = TRUE, filename = NULL, nthreads = NULL)
|
Arguments
cor.dataset |
A NxN dataframe of correlation values created by CorAnalysisDataset or CorAnalysisClusterDataset |
save |
Logical. If TRUE then the dataframe will be saved as a csv file. |
filename |
String. The name for the saved file. |
nthreads |
Number of processor threads for the process. If not specified then the maximum number of logical cores are used. |
Value
Dataframe object in the new format.
Examples
1 2 | correlation.df <- CorAnalysisDataset(Laurasmappings, nthreads = 2)
CytoscapeFile(correlation.df, nthreads = 2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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