FindClusterQuantile: FindClusterQuantile
In nathansam/CircadianTools: Collection of Tools for Detecting Rhythmic Genes

Finds The distances between the center of a cluster and the centers of all other clusters.

1	FindClusterQuantile(cluster.no, centers.df, metric = "euclidean")

`cluster.no`	The number which identifies the cluster.
`centers.df`	Centers of clusters generated by ClusterCenterGenerator.
`metric`	The distance metric to be used to calculate the distances between genes. See parallelDist::parDist for all accepted arguments. Also allows the option of 'abs.correlation'.

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pam.df <- PamClustering(Laurasmappings, k = 10)
cluster.centers <- ClusterCenterGenerator(pam.df)
FindClusterQuantile(1, cluster.centers)

nathansam/CircadianTools documentation built on Dec. 26, 2019, 11:30 a.m.

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