ClassifyCells: Classify New Data

In nukappa/seurat_v2: Seurat : R toolkit for single cell genomics

Description

Classify new data based on the cluster information of the provided object. Random Forests are used as the basis of the classification.

Usage

ClassifyCells(object, classifier, training.genes = NULL,
  training.classes = NULL, new.data = NULL, ...)

Arguments

object	Seurat object on which to train the classifier
classifier	Random Forest classifier from BuildRFClassifier. If not provided, it will be built from the training data provided.
training.genes	Vector of genes to build the classifier on
training.classes	Vector of classes to build the classifier on
new.data	New data to classify
...	additional parameters passed to ranger

Value

Vector of cluster ids

nukappa/seurat_v2 documentation built on May 24, 2019, 9:57 a.m.