DiffTTest: Differential expression testing using Student's t-test

In nukappa/seurat_v2: Seurat : R toolkit for single cell genomics

Description

Identify differentially expressed genes between two groups of cells using the Student's t-test

Usage

DiffTTest(object, cells.1, cells.2, genes.use = NULL, print.bar = TRUE)

Arguments

object	Seurat object
cells.1	Group 1 cells
cells.2	Group 2 cells
genes.use	Genes to test. Default is to use all genes
print.bar	Print a progress bar once expression testing begins (uses pbapply to do this)

Value

Returns a p-value ranked matrix of putative differentially expressed genes.

nukappa/seurat_v2 documentation built on May 24, 2019, 9:57 a.m.