FetchData: Access cellular data

In nukappa/seurat_v2: Seurat : R toolkit for single cell genomics

Description

Retreives data (gene expression, PCA scores, etc, metrics, etc.) for a set of cells in a Seurat object

Usage

FetchData(object, vars.all = NULL, cells.use = NULL, use.imputed = FALSE,
  use.scaled = FALSE, use.raw = FALSE)

Arguments

object	Seurat object
vars.all	List of all variables to fetch
cells.use	Cells to collect data for (default is all cells)
use.imputed	For gene expression, use imputed values
use.scaled	For gene expression, use scaled values
use.raw	For gene expression, use raw values

Value

A data frame with cells as rows and cellular data as columns

nukappa/seurat_v2 documentation built on May 24, 2019, 9:57 a.m.