ColorTSNESplit: Color tSNE Plot Based on Split

In nukappa/seurat_v2: Seurat : R toolkit for single cell genomics

Description

Returns a tSNE plot colored based on whether the cells fall in clusters to the left or to the right of a node split in the cluster tree.

Usage

ColorTSNESplit(object, node, color1 = "red", color2 = "blue",
  color3 = "gray")

Arguments

object	Seurat object
node	Node in cluster tree on which to base the split
color1	Color for the left side of the split
color2	Color for the right side of the split
color3	Color for all other cells
...	Additional parameters for TSNEPlot()

Value

Returns a tSNE plot

nukappa/seurat_v2 documentation built on May 24, 2019, 9:57 a.m.