coerce: Coercion methods

In steinbaugh/DESeqAnalysis: Acid Genomics DESeq2 Analysis Utilities

Coercion methods

Description

Coercion methods

Usage

as.DESeqDataSet(x, ...)

as.DESeqTransform(x, ...)

## S4 method for signature 'DESeqAnalysis'
as.DESeqDataSet(x)

## S4 method for signature 'DESeqAnalysis'
as.DESeqTransform(x)

Arguments

x	Object.
...	Additional arguments.

Value

Modified object, of desired conversion class.

DESeqAnalysis

Supported coercion methods will extract any of these internal objects:

• DESeqDataSet.

• DESeqTransform.

• DESeqResultsList.

Note

Updated 2022-03-30.

Examples

data(deseq)

## DESeqAnalysis ====
dds <- as.DESeqDataSet(deseq)
class(dds)
dt <- as.DESeqTransform(deseq)
class(dt)

steinbaugh/DESeqAnalysis documentation built on June 9, 2025, 7:56 a.m.